BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B09LP1|AL429344
(796 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1537 0.0
3x_Contig1461 560 e-159
>3x_Contig1530
Length = 6216
Score = 1537 bits (774), Expect = 0.0
Identities = 793/798 (99%), Gaps = 2/798 (0%)
Strand = Plus / Plus
Query: 1 gctttttgattcttcgatgtcggctcttcctatcataccgaagcagaattcggtaagcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4891 gctttttgattcttcgatgtcggctcttcctatcataccgaagcagaattcggtaagcgt 4950
Query: 61 tggattgttcacccactaatagggaacgtgagccgggtttagaccgtcgtgaga-aggtt 119
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 4951 tggattgttcacccactaatagggaacgtgagctgggtttagaccgtcgtgagacaggtt 5010
Query: 120 agttttaccctactgatgaatgttatcgcaatagtaattgaacttagtacgagaggaaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5011 agttttaccctactgatgaatgttatcgcaatagtaattgaacttagtacgagaggaaca 5070
Query: 180 gttcattcggataattggtttttgcggctgtctgatcaggcattgccgcgaas-taccat 238
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5071 gttcattcggataattggtttttgcggctgtctgatcaggcattgccgcgaagctaccat 5130
Query: 239 ccgctggattatggctgaacgcctctaagtcagaatccatgctagaacgcgatgatttct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5131 ccgctggattatggctgaacgcctctaagtcagaatccatgctagaacgcgatgatttct 5190
Query: 299 ttgccttgcacaatatagaaggataagaataaggcgtctttttggcgtcgctgaaccata 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5191 ttgccttgcacaatatagaaggataagaataaggcgtctttttggcgtcgctgaaccata 5250
Query: 359 gcaggctggcaacggtgctcttagcggaaaggctttgggtgcttgccggcgaattgcaat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5251 gcaggctggcaacggtgctcttagcggaaaggctttgggtgcttgccggcgaattgcaat 5310
Query: 419 gtcattttgcgcaaggataaatcatttgtatacgacttaaatgtacaacagggtattgta 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5311 gtcattttgcgcaaggataaatcatttgtatacgacttaaatgtacaacagggtattgta 5370
Query: 479 agcagtagagtagccttgttgttacgatctgctgagattaagccttcgttgtctgatttg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5371 agcagtagagtagccttgttgttacgatctgctgagattaagccttcgttgtctgatttg 5430
Query: 539 ttactttctaggttggtggaagacaggtgtcttctccgatgtagagattaattaattgat 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5431 ttactttctaggttggtggaagacaggtgtcttctccgatgtagagattaattaattgat 5490
Query: 599 tgacttttttattttatgatgtctttatattttacattacttaaaaccactttcttcgtt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5491 tgacttttttattttatgatgtctttatattttacattacttaaaaccactttcttcgtt 5550
Query: 659 ctcttttgaagctacctgagactttttgttgttttctttctctataaagtatttgattat 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5551 ctcttttgaagctacctgagactttttgttgttttctttctctataaagtatttgattat 5610
Query: 719 ttgattattagattattattatcatcatcgcatcgacatttgtttttttttttttttttt 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5611 ttgattattagattattattatcatcatcgcatcgacatttgtttttttttttttttttt 5670
Query: 779 tttttttttgtcgckgga 796
|||||||||||||| |||
Sbjct: 5671 tttttttttgtcgctgga 5688
>3x_Contig1461
Length = 5478
Score = 560 bits (282), Expect = e-159
Identities = 340/360 (94%)
Strand = Plus / Minus
Query: 437 aaatcatttgtatacgacttaaatgtacaacagggtattgtaagcagtagagtagccttg 496
||||||||| || || |||||||| ||||||| |||| ||| || || | |||||||
Sbjct: 5062 aaatcatttttaaactacttaaatttacaacattttattttaatcattatattagccttt 5003
Query: 497 ttgttacgatctgctgagattaagccttcgttgtctgatttgttactttctaggttggtg 556
|| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |
Sbjct: 5002 tttttacgatctgctgagattaagcccccgttgtctgattttttactttctaggttgggg 4943
Query: 557 gaagacaggtgtcttctccgatgtagagattaattaattgattgacttttttattttatg 616
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4942 gaagacaggtgtcttccccgatgtagagattaattaattgattgacttttttattttatg 4883
Query: 617 atgtctttatattttacattacttaaaaccactttcttcgttctcttttgaagctacctg 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4882 atgtctttatattttacattacttaaaaccactttcttcgttctcttttgaagctacctg 4823
Query: 677 agactttttgttgttttctttctctataaagtatttgattatttgattattagattatta 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4822 agactttttgttgttttctttctctataaagtatttgattatttgattattagattatta 4763
Query: 737 ttatcatcatcgcatcgacatttgtttttttttttttttttttttttttttgtcgckgga 796
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 4762 ttatcatcatcgcatcgacatttgtttttttttttttttttttttttttttgtcgctgga 4703
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 27,783
Number of Sequences: 1807
Number of extensions: 27783
Number of successful extensions: 6462
Number of sequences better than 1.0e-20: 2
length of query: 796
length of database: 10,358,551
effective HSP length: 16
effective length of query: 780
effective length of database: 10,329,639
effective search space: 8057118420
effective search space used: 8057118420
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)